Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69784.1 | ABK74125.1 | MSMEG_1513 | MSMEG_5623 | Conserved hypothetical protein. | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.516 |
ABK69784.1 | ABK75045.1 | MSMEG_1513 | MSMEG_2820 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.516 |
ABK69784.1 | ABK75273.1 | MSMEG_1513 | MSMEG_0240 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.815 |
ABK69784.1 | ABK75708.1 | MSMEG_1513 | MSMEG_6430 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.519 |
ABK69846.1 | ABK70176.1 | MSMEG_6433 | MSMEG_6432 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.524 |
ABK69846.1 | ABK75708.1 | MSMEG_6433 | MSMEG_6430 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.531 |
ABK70176.1 | ABK69846.1 | MSMEG_6432 | MSMEG_6433 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.524 |
ABK70176.1 | ABK75708.1 | MSMEG_6432 | MSMEG_6430 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.833 |
ABK74125.1 | ABK69784.1 | MSMEG_5623 | MSMEG_1513 | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Conserved hypothetical protein. | 0.516 |
ABK74125.1 | ABK75045.1 | MSMEG_5623 | MSMEG_2820 | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.822 |
ABK74125.1 | ABK75273.1 | MSMEG_5623 | MSMEG_0240 | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Conserved hypothetical protein. | 0.759 |
ABK74125.1 | ABK75708.1 | MSMEG_5623 | MSMEG_6430 | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.822 |
ABK75045.1 | ABK69784.1 | MSMEG_2820 | MSMEG_1513 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.516 |
ABK75045.1 | ABK74125.1 | MSMEG_2820 | MSMEG_5623 | Hypothetical protein; Identified by Glimmer2; putative. | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.822 |
ABK75045.1 | ABK75273.1 | MSMEG_2820 | MSMEG_0240 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.761 |
ABK75045.1 | ABK75708.1 | MSMEG_2820 | MSMEG_6430 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.822 |
ABK75273.1 | ABK69784.1 | MSMEG_0240 | MSMEG_1513 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.815 |
ABK75273.1 | ABK74125.1 | MSMEG_0240 | MSMEG_5623 | Conserved hypothetical protein. | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.759 |
ABK75273.1 | ABK75045.1 | MSMEG_0240 | MSMEG_2820 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.761 |
ABK75273.1 | ABK75708.1 | MSMEG_0240 | MSMEG_6430 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.760 |
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