Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70861.1 | ABK72960.1 | MSMEG_6450 | MSMEG_6449 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.609 |
ABK70861.1 | ABK74861.1 | MSMEG_6450 | MSMEG_6448 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.463 |
ABK72960.1 | ABK70861.1 | MSMEG_6449 | MSMEG_6450 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.609 |
ABK72960.1 | ABK74861.1 | MSMEG_6449 | MSMEG_6448 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.578 |
ABK72960.1 | ABK75780.1 | MSMEG_6449 | MSMEG_0078 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.414 |
ABK72960.1 | espG1 | MSMEG_6449 | MSMEG_0057 | Conserved hypothetical protein. | Conserved hypothetical protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Specific chaperone for cognate PE/PPE proteins, plays an important role in preventing aggregation of PE/PPE dimers (By similarity). Also plays a role in DNA conjugation, in at least recipient strain (By similarity). ECO:0000250|UniProtKB:L8FPI5, ; Belongs to the EspG family. | 0.440 |
ABK74861.1 | ABK70861.1 | MSMEG_6448 | MSMEG_6450 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.463 |
ABK74861.1 | ABK72960.1 | MSMEG_6448 | MSMEG_6449 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.578 |
ABK75780.1 | ABK72960.1 | MSMEG_0078 | MSMEG_6449 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.414 |
ABK75780.1 | espG1 | MSMEG_0078 | MSMEG_0057 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Specific chaperone for cognate PE/PPE proteins, plays an important role in preventing aggregation of PE/PPE dimers (By similarity). Also plays a role in DNA conjugation, in at least recipient strain (By similarity). ECO:0000250|UniProtKB:L8FPI5, ; Belongs to the EspG family. | 0.733 |
espG1 | ABK72960.1 | MSMEG_0057 | MSMEG_6449 | Conserved hypothetical protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Specific chaperone for cognate PE/PPE proteins, plays an important role in preventing aggregation of PE/PPE dimers (By similarity). Also plays a role in DNA conjugation, in at least recipient strain (By similarity). ECO:0000250|UniProtKB:L8FPI5, ; Belongs to the EspG family. | Conserved hypothetical protein. | 0.440 |
espG1 | ABK75780.1 | MSMEG_0057 | MSMEG_0078 | Conserved hypothetical protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Specific chaperone for cognate PE/PPE proteins, plays an important role in preventing aggregation of PE/PPE dimers (By similarity). Also plays a role in DNA conjugation, in at least recipient strain (By similarity). ECO:0000250|UniProtKB:L8FPI5, ; Belongs to the EspG family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.733 |