STRINGSTRING
ABK71047.1 ABK71047.1 ABK74253.1 ABK74253.1 ABK72995.1 ABK72995.1 ABK73031.1 ABK73031.1 ABK76113.1 ABK76113.1 ABK70698.1 ABK70698.1 gcvT gcvT ABK74604.1 ABK74604.1 ABK74518.1 ABK74518.1 katA-2 katA-2 ABK74752.1 ABK74752.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71047.1glycine/D-amino acid oxidase; Identified by match to protein family HMM PF01266. (479 aa)    
Predicted Functional Partners:
ABK74253.1
Taurine-pyruvate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.754
ABK72995.1
Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037.
 
  
 0.672
ABK73031.1
Polyamine-binding lipoprotein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409.
 
  
 0.645
ABK76113.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.542
ABK70698.1
Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
    0.539
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.518
ABK74604.1
Regulatory protein, AsnC/Lrp; Identified by match to protein family HMM PF01037.
 
  
 0.513
ABK74518.1
Identified by match to protein family HMM PF07905.
 
    0.512
katA-2
Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199.
  
 
 0.498
ABK74752.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
 
 0.496
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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