STRINGSTRING
ABK74704.1 ABK74704.1 ABK70046.1 ABK70046.1 ABK75626.1 ABK75626.1 ABK70299.1 ABK70299.1 ABK71540.1 ABK71540.1 ABK71147.1 ABK71147.1 ABK75410.1 ABK75410.1 ABK75486.1 ABK75486.1 dehII-2 dehII-2 ABK75599.1 ABK75599.1 ABK74425.1 ABK74425.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74704.1Conserved hypothetical protein; Identified by match to protein family HMM PF04248. (265 aa)    
Predicted Functional Partners:
ABK70046.1
Conserved hypothetical protein.
 
     0.624
ABK75626.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.570
ABK70299.1
Conserved hypothetical protein.
       0.570
ABK71540.1
Conserved hypothetical protein.
       0.570
ABK71147.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.559
ABK75410.1
Putative secreted protein.
       0.554
ABK75486.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.498
dehII-2
Haloacid dehalogenase, type II; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493.
 
     0.495
ABK75599.1
Conserved hypothetical protein.
  
  
 0.459
ABK74425.1
Conserved hypothetical protein.
 
     0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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