STRINGSTRING
ABK70299.1 ABK70299.1 ABK71540.1 ABK71540.1 ABK70046.1 ABK70046.1 ABK75626.1 ABK75626.1 ABK76111.1 ABK76111.1 ABK70957.1 ABK70957.1 ABK74797.1 ABK74797.1 ABK74397.1 ABK74397.1 ABK72906.1 ABK72906.1 pcaC-4 pcaC-4 ABK73058.1 ABK73058.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70299.1Conserved hypothetical protein. (147 aa)    
Predicted Functional Partners:
ABK71540.1
Conserved hypothetical protein.
 
    0.972
ABK70046.1
Conserved hypothetical protein.
 
    0.960
ABK75626.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.837
ABK76111.1
Conserved hypothetical protein.
  
 0.732
ABK70957.1
Conserved hypothetical protein.
  
    0.712
ABK74797.1
Conserved hypothetical integral membrane protein; Identified by match to protein family HMM TIGR02206.
  
    0.679
ABK74397.1
Conserved hypothetical integral membrane protein; Identified by match to protein family HMM TIGR02206.
  
     0.664
ABK72906.1
Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297.
  
 0.598
pcaC-4
4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627.
  
  
 0.598
ABK73058.1
Conserved hypothetical protein.
 
    0.587
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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