STRINGSTRING
ABK71540.1 ABK71540.1 ABK70046.1 ABK70046.1 ABK70299.1 ABK70299.1 ABK75626.1 ABK75626.1 ABK70957.1 ABK70957.1 ABK74704.1 ABK74704.1 ABK71504.1 ABK71504.1 ABK72890.1 ABK72890.1 ABK73314.1 ABK73314.1 stf0 stf0 ABK73311.1 ABK73311.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71540.1Conserved hypothetical protein. (430 aa)    
Predicted Functional Partners:
ABK70046.1
Conserved hypothetical protein.
 
    0.974
ABK70299.1
Conserved hypothetical protein.
 
    0.972
ABK75626.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.836
ABK70957.1
Conserved hypothetical protein.
  
    0.670
ABK74704.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04248.
       0.570
ABK71504.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
  
     0.558
ABK72890.1
Conserved hypothetical protein.
  
    0.556
ABK73314.1
Condensation domain protein; Identified by match to protein family HMM PF00668.
  
     0.541
stf0
Conserved hypothetical protein; Catalyzes the sulfuryl group transfer from 3'- phosphoadenosine-5'-phosphosulfate (PAPS) to trehalose, leading to trehalose-2-sulfate (T2S). The sulfation of trehalose is the first step in the biosynthesis of sulfolipid-1 (SL-1), a major cell wall glycolipid in pathogenic mycobacteria. Cannot use free glucose and unnatural stereoisomers of trehalose (alpha,beta (neo-trehalose) and beta,beta (iso-trehalose)) as substrates.
  
    0.532
ABK73311.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
    0.527
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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