STRINGSTRING
ABK72047.1 ABK72047.1 ABK70595.1 ABK70595.1 ABK71092.1 ABK71092.1 ABK71334.1 ABK71334.1 ABK73550.1 ABK73550.1 ABK74489.1 ABK74489.1 ABK70698.1 ABK70698.1 ABK75117.1 ABK75117.1 ABK74220.1 ABK74220.1 ABK74243.1 ABK74243.1 ABK70746.1 ABK70746.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72047.1ABC transporter, inner membrane subunit; Identified by match to protein family HMM PF00528. (273 aa)    
Predicted Functional Partners:
ABK70595.1
ABC transporter, membrane spanning protein; Identified by match to protein family HMM PF00528.
 
  
 0.969
ABK71092.1
Sulfate/thiosulfate import ATP-binding protein CysA 2; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily.
 
  
 0.961
ABK71334.1
ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein.
 
  
 0.954
ABK73550.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.863
ABK74489.1
ABC transporter, periplasmic substrate-binding protein, putative.
 
  
 0.797
ABK70698.1
Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.684
ABK75117.1
Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily.
 
  
 0.680
ABK74220.1
Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.674
ABK74243.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.673
ABK70746.1
Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409.
 
  
 0.661
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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