STRINGSTRING
ABK74259.1 ABK74259.1 ABK71654.1 ABK71654.1 ABK71788.1 ABK71788.1 htpX htpX serB serB serB-2 serB-2 ABK70316.1 ABK70316.1 ABK74091.1 ABK74091.1 ABK72513.1 ABK72513.1 ABK73670.1 ABK73670.1 cobK cobK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74259.1Identified by match to protein family HMM PF00300. (235 aa)    
Predicted Functional Partners:
ABK71654.1
Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family.
  
  
 0.863
ABK71788.1
Transcriptional regulatory protein; Identified by match to protein family HMM PF00165.
  
  
 0.795
htpX
Putative protease HtpX; Identified by match to protein family HMM PF01435; Belongs to the peptidase M48B family.
  
    0.612
serB
Phosphoserine phosphatase; Identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488.
     
 0.568
serB-2
Phosphoserine phosphatase; Identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488.
     
 0.567
ABK70316.1
Amidohydrolase 2; Identified by match to protein family HMM PF04909.
  
    0.564
ABK74091.1
Peptidase S1 and S6, chymotrypsin/Hap; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.
  
    0.559
ABK72513.1
Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family.
  
  
 0.534
ABK73670.1
isovaleryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
 
 0.516
cobK
Precorrin-6x reductase; Identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715.
  
  
 0.507
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (20%) [HD]