STRINGSTRING
ABK72266.1 ABK72266.1 ABK74554.1 ABK74554.1 ABK70103.1 ABK70103.1 ABK75254.1 ABK75254.1 ABK72313.1 ABK72313.1 ABK69713.1 ABK69713.1 ABK70188.1 ABK70188.1 ABK71267.1 ABK71267.1 ABK72199.1 ABK72199.1 ABK70370.1 ABK70370.1 ABK70195.1 ABK70195.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72266.1Dehydrogenase; Identified by match to protein family HMM PF00106. (300 aa)    
Predicted Functional Partners:
ABK74554.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.778
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.742
ABK75254.1
Putative oxidoreductase; Identified by match to protein family HMM PF01243.
 
   0.714
ABK72313.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
  
  0.698
ABK69713.1
Nonspecific lipid-transfer protein.
  
 
 0.621
ABK70188.1
Dihydrokaempferol 4-reductase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
  
 
 0.609
ABK71267.1
Acyl dehydratase; Identified by match to protein family HMM PF01796.
       0.549
ABK72199.1
Two-component sensor histidine kinase; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518.
  
 0.526
ABK70370.1
Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes.
  
 0.516
ABK70195.1
Secreted protein.
  
 
 0.514
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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