Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69713.1 | ABK70188.1 | MSMEG_6561 | MSMEG_6563 | Nonspecific lipid-transfer protein. | Dihydrokaempferol 4-reductase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | 0.802 |
ABK69713.1 | ABK71267.1 | MSMEG_6561 | MSMEG_6560 | Nonspecific lipid-transfer protein. | Acyl dehydratase; Identified by match to protein family HMM PF01796. | 0.978 |
ABK69713.1 | ABK72313.1 | MSMEG_6561 | MSMEG_6562 | Nonspecific lipid-transfer protein. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.934 |
ABK69713.1 | ABK73497.1 | MSMEG_6561 | MSMEG_5991 | Nonspecific lipid-transfer protein. | MaoC like domain, putative; Identified by match to protein family HMM PF01575. | 0.809 |
ABK69713.1 | ABK74844.1 | MSMEG_6561 | MSMEG_4814 | Nonspecific lipid-transfer protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.718 |
ABK70188.1 | ABK69713.1 | MSMEG_6563 | MSMEG_6561 | Dihydrokaempferol 4-reductase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | Nonspecific lipid-transfer protein. | 0.802 |
ABK70188.1 | ABK71267.1 | MSMEG_6563 | MSMEG_6560 | Dihydrokaempferol 4-reductase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | Acyl dehydratase; Identified by match to protein family HMM PF01796. | 0.777 |
ABK70188.1 | ABK72313.1 | MSMEG_6563 | MSMEG_6562 | Dihydrokaempferol 4-reductase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.813 |
ABK71267.1 | ABK69713.1 | MSMEG_6560 | MSMEG_6561 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | Nonspecific lipid-transfer protein. | 0.978 |
ABK71267.1 | ABK70188.1 | MSMEG_6560 | MSMEG_6563 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | Dihydrokaempferol 4-reductase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | 0.777 |
ABK71267.1 | ABK72313.1 | MSMEG_6560 | MSMEG_6562 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.867 |
ABK71267.1 | ABK72364.1 | MSMEG_6560 | MSMEG_4778 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | Putative thiolase; Identified by match to protein family HMM PF02803; Belongs to the thiolase-like superfamily. Thiolase family. | 0.852 |
ABK71267.1 | ABK73497.1 | MSMEG_6560 | MSMEG_5991 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | MaoC like domain, putative; Identified by match to protein family HMM PF01575. | 0.917 |
ABK71267.1 | ABK73835.1 | MSMEG_6560 | MSMEG_2236 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | Putative thiolase; Identified by match to protein family HMM PF02803; Belongs to the thiolase-like superfamily. Thiolase family. | 0.850 |
ABK71267.1 | ABK74235.1 | MSMEG_6560 | MSMEG_3844 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | Lipid-transfer protein. | 0.835 |
ABK71267.1 | ABK74714.1 | MSMEG_6560 | MSMEG_5990 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | Lipid-transfer protein. | 0.888 |
ABK71267.1 | ABK74844.1 | MSMEG_6560 | MSMEG_4814 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.905 |
ABK71267.1 | ABK75469.1 | MSMEG_6560 | MSMEG_5923 | Acyl dehydratase; Identified by match to protein family HMM PF01796. | acetyl-CoA acetyltransferase. | 0.713 |
ABK72313.1 | ABK69713.1 | MSMEG_6562 | MSMEG_6561 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | Nonspecific lipid-transfer protein. | 0.934 |
ABK72313.1 | ABK70188.1 | MSMEG_6562 | MSMEG_6563 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | Dihydrokaempferol 4-reductase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | 0.813 |
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