Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69679.1 | ABK70110.1 | MSMEG_4267 | MSMEG_2575 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Conserved hypothetical protein. | 0.999 |
| ABK69679.1 | ABK73621.1 | MSMEG_4267 | MSMEG_4263 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | 0.999 |
| ABK69679.1 | ABK74914.1 | MSMEG_4267 | MSMEG_4268 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. | 0.999 |
| ABK69679.1 | ABK75063.1 | MSMEG_4267 | MSMEG_6569 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Conserved hypothetical protein; Identified by match to protein family HMM PF04314. | 0.785 |
| ABK69679.1 | ABK75074.1 | MSMEG_4267 | MSMEG_4261 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | 0.999 |
| ABK69679.1 | ctaD | MSMEG_4267 | MSMEG_4437 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| ABK70110.1 | ABK69679.1 | MSMEG_2575 | MSMEG_4267 | Conserved hypothetical protein. | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.999 |
| ABK70110.1 | ABK73621.1 | MSMEG_2575 | MSMEG_4263 | Conserved hypothetical protein. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | 0.999 |
| ABK70110.1 | ABK74914.1 | MSMEG_2575 | MSMEG_4268 | Conserved hypothetical protein. | Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. | 0.999 |
| ABK70110.1 | ABK75063.1 | MSMEG_2575 | MSMEG_6569 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04314. | 0.758 |
| ABK70110.1 | ABK75074.1 | MSMEG_2575 | MSMEG_4261 | Conserved hypothetical protein. | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | 0.999 |
| ABK70110.1 | ctaD | MSMEG_2575 | MSMEG_4437 | Conserved hypothetical protein. | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| ABK71271.1 | ABK72183.1 | MSMEG_6436 | MSMEG_6567 | Copper resistance protein CopC; Identified by match to protein family HMM PF04234. | Iron-dependent peroxidase; Identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01413. | 0.746 |
| ABK71271.1 | ABK73371.1 | MSMEG_6436 | MSMEG_5420 | Copper resistance protein CopC; Identified by match to protein family HMM PF04234. | Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.747 |
| ABK71271.1 | ABK75063.1 | MSMEG_6436 | MSMEG_6569 | Copper resistance protein CopC; Identified by match to protein family HMM PF04234. | Conserved hypothetical protein; Identified by match to protein family HMM PF04314. | 0.912 |
| ABK71271.1 | ABK75243.1 | MSMEG_6436 | MSMEG_6570 | Copper resistance protein CopC; Identified by match to protein family HMM PF04234. | Integral membrane protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | 0.739 |
| ABK72183.1 | ABK71271.1 | MSMEG_6567 | MSMEG_6436 | Iron-dependent peroxidase; Identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01413. | Copper resistance protein CopC; Identified by match to protein family HMM PF04234. | 0.746 |
| ABK72183.1 | ABK75063.1 | MSMEG_6567 | MSMEG_6569 | Iron-dependent peroxidase; Identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01413. | Conserved hypothetical protein; Identified by match to protein family HMM PF04314. | 0.978 |
| ABK72183.1 | ABK75243.1 | MSMEG_6567 | MSMEG_6570 | Iron-dependent peroxidase; Identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01413. | Integral membrane protein; Identified by match to protein family HMM PF03413; match to protein family HMM PF03929. | 0.909 |
| ABK73371.1 | ABK71271.1 | MSMEG_5420 | MSMEG_6436 | Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Copper resistance protein CopC; Identified by match to protein family HMM PF04234. | 0.747 |
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