Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69928.1 | ABK71046.1 | MSMEG_6592 | MSMEG_6589 | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106. | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | 0.553 |
ABK69928.1 | ABK75636.1 | MSMEG_6592 | MSMEG_6590 | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106. | Conserved hypothetical protein. | 0.806 |
ABK70316.1 | ABK70713.1 | MSMEG_6547 | MSMEG_0263 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | 0.746 |
ABK70316.1 | ABK70734.1 | MSMEG_6547 | MSMEG_6624 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.412 |
ABK70316.1 | ABK72357.1 | MSMEG_6547 | MSMEG_4884 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.769 |
ABK70316.1 | ABK75636.1 | MSMEG_6547 | MSMEG_6590 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.562 |
ABK70713.1 | ABK70316.1 | MSMEG_0263 | MSMEG_6547 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.746 |
ABK70713.1 | ABK70734.1 | MSMEG_0263 | MSMEG_6624 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Conserved hypothetical protein. | 0.539 |
ABK70713.1 | ABK72357.1 | MSMEG_0263 | MSMEG_4884 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Conserved hypothetical protein. | 0.782 |
ABK70713.1 | ABK73240.1 | MSMEG_0263 | MSMEG_4837 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.734 |
ABK70713.1 | ABK74433.1 | MSMEG_0263 | MSMEG_2245 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Bile-acid 7-alpha dehydratase. | 0.664 |
ABK70713.1 | ABK75636.1 | MSMEG_0263 | MSMEG_6590 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Conserved hypothetical protein. | 0.521 |
ABK70734.1 | ABK70316.1 | MSMEG_6624 | MSMEG_6547 | Conserved hypothetical protein. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.412 |
ABK70734.1 | ABK70713.1 | MSMEG_6624 | MSMEG_0263 | Conserved hypothetical protein. | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | 0.539 |
ABK70734.1 | ABK72357.1 | MSMEG_6624 | MSMEG_4884 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.467 |
ABK70734.1 | ABK74433.1 | MSMEG_6624 | MSMEG_2245 | Conserved hypothetical protein. | Bile-acid 7-alpha dehydratase. | 0.663 |
ABK70734.1 | ABK75636.1 | MSMEG_6624 | MSMEG_6590 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.701 |
ABK71046.1 | ABK69928.1 | MSMEG_6589 | MSMEG_6592 | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106. | 0.553 |
ABK71046.1 | ABK75636.1 | MSMEG_6589 | MSMEG_6590 | ISMsm5, transposase; Identified by similarity to GB:CAD18826.1. | Conserved hypothetical protein. | 0.553 |
ABK72357.1 | ABK70316.1 | MSMEG_4884 | MSMEG_6547 | Conserved hypothetical protein. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.769 |
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