STRINGSTRING
ABK70501.1 ABK70501.1 ABK73018.1 ABK73018.1 ABK71835.1 ABK71835.1 ABK75653.1 ABK75653.1 ABK74827.1 ABK74827.1 ABK72673.1 ABK72673.1 ABK69918.1 ABK69918.1 ABK71953.1 ABK71953.1 ABK69956.1 ABK69956.1 ABK69548.1 ABK69548.1 sufC sufC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70501.1Aminotransferase, class V family protein; Identified by match to protein family HMM PF00266. (576 aa)    
Predicted Functional Partners:
ABK73018.1
SUF system FeS assembly protein, NifU family protein; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994.
  
 
 0.879
ABK71835.1
Aminotransferase class-III; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.846
ABK75653.1
Aminotransferase class-III; Identified by match to protein family HMM PF00202; match to protein family HMM PF01636.
  
  
 0.846
ABK74827.1
Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.841
ABK72673.1
Putative aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.818
ABK69918.1
Conserved hypothetical protein.
      
 0.814
ABK71953.1
Identified by match to protein family HMM PF00005.
  
  
 0.793
ABK69956.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  
  
 0.788
ABK69548.1
Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372.
  
   0.671
sufC
FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978.
  
  
 0.654
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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