STRINGSTRING
ABK74827.1 ABK74827.1 ABK69956.1 ABK69956.1 ABK71953.1 ABK71953.1 ABK75561.1 ABK75561.1 ABK73127.1 ABK73127.1 ABK71429.1 ABK71429.1 ABK70751.1 ABK70751.1 ehuC ehuC ABK70491.1 ABK70491.1 ehuC-2 ehuC-2 ehuD ehuD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74827.1Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. (324 aa)    
Predicted Functional Partners:
ABK69956.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.971
ABK71953.1
Identified by match to protein family HMM PF00005.
 
 
 0.969
ABK75561.1
ABC polar amino acid family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.877
ABK73127.1
ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.876
ABK71429.1
ABC polar amino acid transporter, inner membrane subunit; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.873
ABK70751.1
Identified by match to protein family HMM PF00005.
 
 
 0.870
ehuC
Ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03004.
 
 
 0.870
ABK70491.1
Identified by match to protein family HMM PF00005.
 
 
 0.869
ehuC-2
Ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03004.
 
 
 0.869
ehuD
Ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03003.
 
 
 0.868
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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