Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70059.1 | ABK72468.1 | MSMEG_6889 | MSMEG_6600 | Transposase; Identified by match to protein family HMM PF01527. | Transposase; Identified by match to protein family HMM PF00665. | 0.423 |
ABK72352.1 | ABK72468.1 | MSMEG_4088 | MSMEG_6600 | Transposase; Identified by match to protein family HMM PF01527. | Transposase; Identified by match to protein family HMM PF00665. | 0.430 |
ABK72468.1 | ABK70059.1 | MSMEG_6600 | MSMEG_6889 | Transposase; Identified by match to protein family HMM PF00665. | Transposase; Identified by match to protein family HMM PF01527. | 0.423 |
ABK72468.1 | ABK72352.1 | MSMEG_6600 | MSMEG_4088 | Transposase; Identified by match to protein family HMM PF00665. | Transposase; Identified by match to protein family HMM PF01527. | 0.430 |
ABK72468.1 | ABK73094.1 | MSMEG_6600 | MSMEG_4106 | Transposase; Identified by match to protein family HMM PF00665. | Transposase; Identified by match to protein family HMM PF01527. | 0.438 |
ABK72468.1 | ABK75353.1 | MSMEG_6600 | MSMEG_1250 | Transposase; Identified by match to protein family HMM PF00665. | ISMsm7, transposase orfA; Identified by similarity to GP:6572439; match to protein family HMM PF01527. | 0.459 |
ABK73094.1 | ABK72468.1 | MSMEG_4106 | MSMEG_6600 | Transposase; Identified by match to protein family HMM PF01527. | Transposase; Identified by match to protein family HMM PF00665. | 0.438 |
ABK75353.1 | ABK72468.1 | MSMEG_1250 | MSMEG_6600 | ISMsm7, transposase orfA; Identified by similarity to GP:6572439; match to protein family HMM PF01527. | Transposase; Identified by match to protein family HMM PF00665. | 0.459 |