STRINGSTRING
ABK75594.1 ABK75594.1 ABK73531.1 ABK73531.1 ABK70546.1 ABK70546.1 ABK70702.1 ABK70702.1 ABK72509.1 ABK72509.1 ABK74782.1 ABK74782.1 ABK71957.1 ABK71957.1 ABK73891.1 ABK73891.1 ABK72333.1 ABK72333.1 ABK73660.1 ABK73660.1 ABK69528.1 ABK69528.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75594.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (199 aa)    
Predicted Functional Partners:
ABK73531.1
Conserved hypothetical protein.
  
    0.766
ABK70546.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.766
ABK70702.1
Conserved hypothetical protein.
 
    0.764
ABK72509.1
Conserved hypothetical protein.
 
    0.761
ABK74782.1
Identified by match to protein family HMM PF04909.
 
     0.738
ABK71957.1
Identified by match to protein family HMM PF04909.
 
     0.732
ABK73891.1
acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF00441.
 
     0.728
ABK72333.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.711
ABK73660.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
  
     0.703
ABK69528.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
  
     0.701
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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