STRINGSTRING
ABK71989.1 ABK71989.1 ABK72498.1 ABK72498.1 ABK70577.1 ABK70577.1 ABK74689.1 ABK74689.1 ABK73354.1 ABK73354.1 ABK74862.1 ABK74862.1 ABK75474.1 ABK75474.1 ABK75594.1 ABK75594.1 moxR-2 moxR-2 ABK75491.1 ABK75491.1 ABK71912.1 ABK71912.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71989.1Hypothetical protein; Identified by Glimmer2; putative. (316 aa)    
Predicted Functional Partners:
ABK72498.1
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.976
ABK70577.1
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.951
ABK74689.1
Protein of unknown function DUF58, putative.
 
    0.844
ABK73354.1
Conserved hypothetical protein.
  
     0.669
ABK74862.1
Conserved hypothetical protein.
  
    0.644
ABK75474.1
Conserved hypothetical protein.
  
    0.643
ABK75594.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.627
moxR-2
Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
 
    0.615
ABK75491.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.583
ABK71912.1
Conserved hypothetical protein.
  
    0.577
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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