moxR-2 protein (Mycolicibacterium smegmatis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

moxR-2

Identified by match to protein family HMM PF07726; match to protein family HMM PF07728. (333 aa)

Predicted Functional Partners:

ABK74689.1

0.979

ABK72208.1

0.895

ABK72529.1

0.846

ABK73991.1

0.825

ABK72979.1

0.764

ABK73767.1

0.703

ABK72305.1

0.693

ABK75350.1

0.679

ABK72498.1

0.651

ABK70345.1

0.635

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70345.1	ABK72529.1	MSMEG_3149	MSMEG_3148	Conserved hypothetical protein; Identified by match to protein family HMM PF00092.	Conserved hypothetical protein.	0.985
ABK70345.1	ABK74689.1	MSMEG_3149	MSMEG_6610	Conserved hypothetical protein; Identified by match to protein family HMM PF00092.	Protein of unknown function DUF58, putative.	0.833
ABK70345.1	moxR-2	MSMEG_3149	MSMEG_6612	Conserved hypothetical protein; Identified by match to protein family HMM PF00092.	Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.	0.635
ABK72208.1	ABK72498.1	MSMEG_6609	MSMEG_6607	Hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.567
ABK72208.1	ABK73767.1	MSMEG_6609	MSMEG_6613	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein.	0.684
ABK72208.1	ABK74689.1	MSMEG_6609	MSMEG_6610	Hypothetical protein; Identified by Glimmer2; putative.	Protein of unknown function DUF58, putative.	0.898
ABK72208.1	moxR-2	MSMEG_6609	MSMEG_6612	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.	0.895
ABK72305.1	ABK72979.1	MSMEG_6575	MSMEG_3121	Beta-lactamase; Identified by match to protein family HMM PF00144.	Identified by match to protein family HMM PF01022.	0.815
ABK72305.1	moxR-2	MSMEG_6575	MSMEG_6612	Beta-lactamase; Identified by match to protein family HMM PF00144.	Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.	0.693
ABK72498.1	ABK72208.1	MSMEG_6607	MSMEG_6609	Hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.567
ABK72498.1	ABK74689.1	MSMEG_6607	MSMEG_6610	Hypothetical protein; Identified by Glimmer2; putative.	Protein of unknown function DUF58, putative.	0.861
ABK72498.1	moxR-2	MSMEG_6607	MSMEG_6612	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.	0.651
ABK72529.1	ABK70345.1	MSMEG_3148	MSMEG_3149	Conserved hypothetical protein.	Conserved hypothetical protein; Identified by match to protein family HMM PF00092.	0.985
ABK72529.1	moxR-2	MSMEG_3148	MSMEG_6612	Conserved hypothetical protein.	Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.	0.846
ABK72979.1	ABK72305.1	MSMEG_3121	MSMEG_6575	Identified by match to protein family HMM PF01022.	Beta-lactamase; Identified by match to protein family HMM PF00144.	0.815
ABK72979.1	moxR-2	MSMEG_3121	MSMEG_6612	Identified by match to protein family HMM PF01022.	Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.	0.764
ABK73767.1	ABK72208.1	MSMEG_6613	MSMEG_6609	Conserved hypothetical protein.	Hypothetical protein; Identified by Glimmer2; putative.	0.684
ABK73767.1	ABK74689.1	MSMEG_6613	MSMEG_6610	Conserved hypothetical protein.	Protein of unknown function DUF58, putative.	0.714
ABK73767.1	moxR-2	MSMEG_6613	MSMEG_6612	Conserved hypothetical protein.	Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.	0.703
ABK73991.1	moxR-2	MSMEG_4582	MSMEG_6612	Conserved hypothetical protein; Identified by match to protein family HMM PF05762.	Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.	0.825