STRINGSTRING
ABK70192.1 ABK70192.1 ABK74743.1 ABK74743.1 ABK75556.1 ABK75556.1 ABK70734.1 ABK70734.1 ABK71126.1 ABK71126.1 bluB bluB ABK69634.1 ABK69634.1 ABK71153.1 ABK71153.1 ABK74785.1 ABK74785.1 ABK74109.1 ABK74109.1 ABK75647.1 ABK75647.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70192.1Identified by match to protein family HMM PF00881. (223 aa)    
Predicted Functional Partners:
ABK74743.1
Identified by match to protein family HMM PF00903.
 
  
 0.767
ABK75556.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.689
ABK70734.1
Conserved hypothetical protein.
 
    0.666
ABK71126.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
  
   0.609
bluB
cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476.
  
     0.578
ABK69634.1
Dehydrogenase; Identified by match to protein family HMM PF00106.
  
   0.556
ABK71153.1
ABC-type drug export system, membrane protein; Identified by match to protein family HMM PF01061.
 
  
 0.519
ABK74785.1
Identified by match to protein family HMM PF00903.
       0.481
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
  
  
 0.460
ABK75647.1
Putative transposase; Identified by match to protein family HMM PF00589.
  
    0.430
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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