Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69634.1 | ABK70192.1 | MSMEG_6623 | MSMEG_6627 | Dehydrogenase; Identified by match to protein family HMM PF00106. | Identified by match to protein family HMM PF00881. | 0.556 |
ABK69634.1 | ABK70734.1 | MSMEG_6623 | MSMEG_6624 | Dehydrogenase; Identified by match to protein family HMM PF00106. | Conserved hypothetical protein. | 0.865 |
ABK69634.1 | ABK71126.1 | MSMEG_6623 | MSMEG_6626 | Dehydrogenase; Identified by match to protein family HMM PF00106. | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106. | 0.767 |
ABK69634.1 | ABK74743.1 | MSMEG_6623 | MSMEG_6625 | Dehydrogenase; Identified by match to protein family HMM PF00106. | Identified by match to protein family HMM PF00903. | 0.842 |
ABK69634.1 | ABK75556.1 | MSMEG_6623 | MSMEG_6628 | Dehydrogenase; Identified by match to protein family HMM PF00106. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.495 |
ABK69634.1 | ABK75647.1 | MSMEG_6623 | MSMEG_4156 | Dehydrogenase; Identified by match to protein family HMM PF00106. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.530 |
ABK70192.1 | ABK69634.1 | MSMEG_6627 | MSMEG_6623 | Identified by match to protein family HMM PF00881. | Dehydrogenase; Identified by match to protein family HMM PF00106. | 0.556 |
ABK70192.1 | ABK70734.1 | MSMEG_6627 | MSMEG_6624 | Identified by match to protein family HMM PF00881. | Conserved hypothetical protein. | 0.666 |
ABK70192.1 | ABK71126.1 | MSMEG_6627 | MSMEG_6626 | Identified by match to protein family HMM PF00881. | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106. | 0.609 |
ABK70192.1 | ABK71153.1 | MSMEG_6627 | MSMEG_6510 | Identified by match to protein family HMM PF00881. | ABC-type drug export system, membrane protein; Identified by match to protein family HMM PF01061. | 0.519 |
ABK70192.1 | ABK74109.1 | MSMEG_6627 | MSMEG_1642 | Identified by match to protein family HMM PF00881. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | 0.460 |
ABK70192.1 | ABK74743.1 | MSMEG_6627 | MSMEG_6625 | Identified by match to protein family HMM PF00881. | Identified by match to protein family HMM PF00903. | 0.767 |
ABK70192.1 | ABK74785.1 | MSMEG_6627 | MSMEG_6630 | Identified by match to protein family HMM PF00881. | Identified by match to protein family HMM PF00903. | 0.481 |
ABK70192.1 | ABK75556.1 | MSMEG_6627 | MSMEG_6628 | Identified by match to protein family HMM PF00881. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.689 |
ABK70192.1 | ABK75647.1 | MSMEG_6627 | MSMEG_4156 | Identified by match to protein family HMM PF00881. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.430 |
ABK70192.1 | bluB | MSMEG_6627 | MSMEG_6053 | Identified by match to protein family HMM PF00881. | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | 0.578 |
ABK70734.1 | ABK69634.1 | MSMEG_6624 | MSMEG_6623 | Conserved hypothetical protein. | Dehydrogenase; Identified by match to protein family HMM PF00106. | 0.865 |
ABK70734.1 | ABK70192.1 | MSMEG_6624 | MSMEG_6627 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00881. | 0.666 |
ABK70734.1 | ABK71126.1 | MSMEG_6624 | MSMEG_6626 | Conserved hypothetical protein. | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106. | 0.775 |
ABK70734.1 | ABK74743.1 | MSMEG_6624 | MSMEG_6625 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00903. | 0.895 |
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