STRINGSTRING
ABK75556.1 ABK75556.1 ABK70734.1 ABK70734.1 ABK74743.1 ABK74743.1 ABK74316.1 ABK74316.1 ABK74785.1 ABK74785.1 ABK70765.1 ABK70765.1 ABK72704.1 ABK72704.1 ABK70192.1 ABK70192.1 ABK75647.1 ABK75647.1 ABK73750.1 ABK73750.1 ABK73468.1 ABK73468.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75556.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (203 aa)    
Predicted Functional Partners:
ABK70734.1
Conserved hypothetical protein.
 
     0.824
ABK74743.1
Identified by match to protein family HMM PF00903.
 
     0.822
ABK74316.1
Conserved hypothetical protein.
 
    0.727
ABK74785.1
Identified by match to protein family HMM PF00903.
 
    0.714
ABK70765.1
Identified by match to protein family HMM PF04909.
 
     0.711
ABK72704.1
Identified by match to protein family HMM PF04909.
 
     0.711
ABK70192.1
Identified by match to protein family HMM PF00881.
 
    0.689
ABK75647.1
Putative transposase; Identified by match to protein family HMM PF00589.
  
  
 0.688
ABK73750.1
Identified by match to protein family HMM PF04909.
 
     0.684
ABK73468.1
Putative regulatory protein; Identified by match to protein family HMM PF00196.
  
   
 0.649
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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