STRINGSTRING
mdcC mdcC mdcB mdcB mdcG mdcG ABK70322.1 ABK70322.1 ABK70989.1 ABK70989.1 mdcH mdcH ABK73654.1 ABK73654.1 ABK71938.1 ABK71938.1 ABK75359.1 ABK75359.1 ABK69601.1 ABK69601.1 ABK75830.1 ABK75830.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
mdcCMalonate decarboxylase acyl carrier protein; Identified by match to protein family HMM PF06857; match to protein family HMM TIGR03130. (102 aa)    
Predicted Functional Partners:
mdcB
triphosphoribosyl-dephospho-CoA synthase MdcB; Identified by match to protein family HMM PF01874; match to protein family HMM TIGR03132.
 
  
 0.989
mdcG
phosphoribosyl-dephospho-CoA transferase MdcG; Identified by match to protein family HMM TIGR03135.
 
  
 0.984
ABK70322.1
Alpha subunit of malonate decarboxylase.
 
  
 0.973
ABK70989.1
Beta subunit of malonate decarboxylase; Identified by match to protein family HMM PF01039; match to protein family HMM PF06833; match to protein family HMM TIGR03133; match to protein family HMM TIGR03134.
 
  
 0.971
mdcH
Malonate decarboxylase, epsilon subunit; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR03131.
 
  
 0.932
ABK73654.1
Alpha subunit of malonate decarboxylase.
 
  
 0.889
ABK71938.1
HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.637
ABK75359.1
malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.637
ABK69601.1
Conserved hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.637
ABK75830.1
malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.637
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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