Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69842.1 | ABK72343.1 | MSMEG_2203 | MSMEG_6838 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Putative esterase. | 0.499 |
ABK69842.1 | ABK72895.1 | MSMEG_2203 | MSMEG_1797 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Salicylate esterase; Identified by match to protein family HMM PF00561. | 0.497 |
ABK69842.1 | ABK74338.1 | MSMEG_2203 | MSMEG_6658 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561. | 0.499 |
ABK69842.1 | pks | MSMEG_2203 | MSMEG_0408 | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.437 |
ABK69865.1 | ABK74338.1 | MSMEG_3487 | MSMEG_6658 | Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277. | Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561. | 0.484 |
ABK69865.1 | ABK74611.1 | MSMEG_3487 | MSMEG_3470 | Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277. | NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | 0.521 |
ABK71472.1 | ABK73654.1 | MSMEG_6655 | MSMEG_6657 | Conserved hypothetical protein. | Alpha subunit of malonate decarboxylase. | 0.590 |
ABK71472.1 | ABK74338.1 | MSMEG_6655 | MSMEG_6658 | Conserved hypothetical protein. | Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561. | 0.592 |
ABK71472.1 | ABK75870.1 | MSMEG_6655 | MSMEG_6656 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02899; Belongs to the 'phage' integrase family. | 0.663 |
ABK72343.1 | ABK69842.1 | MSMEG_6838 | MSMEG_2203 | Putative esterase. | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | 0.499 |
ABK72343.1 | ABK72895.1 | MSMEG_6838 | MSMEG_1797 | Putative esterase. | Salicylate esterase; Identified by match to protein family HMM PF00561. | 0.775 |
ABK72343.1 | ABK74338.1 | MSMEG_6838 | MSMEG_6658 | Putative esterase. | Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561. | 0.583 |
ABK72343.1 | pks | MSMEG_6838 | MSMEG_0408 | Putative esterase. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.490 |
ABK72895.1 | ABK69842.1 | MSMEG_1797 | MSMEG_2203 | Salicylate esterase; Identified by match to protein family HMM PF00561. | Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. | 0.497 |
ABK72895.1 | ABK72343.1 | MSMEG_1797 | MSMEG_6838 | Salicylate esterase; Identified by match to protein family HMM PF00561. | Putative esterase. | 0.775 |
ABK72895.1 | ABK74338.1 | MSMEG_1797 | MSMEG_6658 | Salicylate esterase; Identified by match to protein family HMM PF00561. | Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561. | 0.672 |
ABK72895.1 | pks | MSMEG_1797 | MSMEG_0408 | Salicylate esterase; Identified by match to protein family HMM PF00561. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.491 |
ABK73536.1 | ABK74338.1 | MSMEG_6710 | MSMEG_6658 | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561. | 0.506 |
ABK73536.1 | pks | MSMEG_6710 | MSMEG_0408 | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.465 |
ABK73654.1 | ABK71472.1 | MSMEG_6657 | MSMEG_6655 | Alpha subunit of malonate decarboxylase. | Conserved hypothetical protein. | 0.590 |
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