STRINGSTRING
ABK74338.1 ABK74338.1 ABK75870.1 ABK75870.1 ABK73654.1 ABK73654.1 ABK72895.1 ABK72895.1 ABK74611.1 ABK74611.1 ABK71472.1 ABK71472.1 ABK72343.1 ABK72343.1 ABK73536.1 ABK73536.1 ABK69842.1 ABK69842.1 pks pks ABK69865.1 ABK69865.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74338.1Alpha/beta hydrolase fold; Identified by match to protein family HMM PF00561. (276 aa)    
Predicted Functional Partners:
ABK75870.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
  
  
 0.785
ABK73654.1
Alpha subunit of malonate decarboxylase.
  
    0.781
ABK72895.1
Salicylate esterase; Identified by match to protein family HMM PF00561.
  
    0.672
ABK74611.1
NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
  
 
 0.666
ABK71472.1
Conserved hypothetical protein.
  
    0.592
ABK72343.1
Putative esterase.
  
    0.583
ABK73536.1
Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561.
 
  
 0.506
ABK69842.1
Alpha/beta hydrolase; Identified by match to protein family HMM PF00561.
  
 0.499
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
  
 
 0.490
ABK69865.1
Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277.
 
    0.484
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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