STRINGSTRING
ABK71639.1 ABK71639.1 ABK70926.1 ABK70926.1 ABK73388.1 ABK73388.1 ABK70970.1 ABK70970.1 ABK70205.1 ABK70205.1 ABK71217.1 ABK71217.1 ABK71332.1 ABK71332.1 ABK75980.1 ABK75980.1 ureB ureB ABK75630.1 ABK75630.1 ABK69762.1 ABK69762.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71639.1Permease, cytosine/purines, uracil, thiamine, allantoin family protein; Identified by match to protein family HMM PF02133; Belongs to the purine-cytosine permease (2.A.39) family. (478 aa)    
Predicted Functional Partners:
ABK70926.1
Permease for cytosine/purines, uracil, thiamine, allantoin transporter; Identified by match to protein family HMM PF02133.
 
  
 0.720
ABK73388.1
Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801.
  
  
 0.681
ABK70970.1
Putative pyrimidine permease RutG; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801.
  
  
 0.673
ABK70205.1
Amino acid permease, putative; Identified by match to protein family HMM PF00324.
  
  
 0.670
ABK71217.1
Amino acid permease; Identified by match to protein family HMM PF00324.
  
  
 0.638
ABK71332.1
Amino acid permease; Identified by match to protein family HMM PF00324.
  
  
 0.616
ABK75980.1
Branched-chain amino acid ABC-type transport system, permease component; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.605
ureB
Urease, beta subunit; Identified by match to protein family HMM PF00699; match to protein family HMM TIGR00192; Belongs to the urease beta subunit family.
  
  
 0.601
ABK75630.1
Putative periplasmic binding protein; Identified by match to protein family HMM PF01094.
  
  
 0.538
ABK69762.1
Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835.
     
 0.519
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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