Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71020.1 | ABK71204.1 | MSMEG_1349 | MSMEG_0391 | Identified by match to protein family HMM PF04946. | Rmt3 protein. | 0.664 |
| ABK71020.1 | ABK73468.1 | MSMEG_1349 | MSMEG_4431 | Identified by match to protein family HMM PF04946. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.506 |
| ABK71020.1 | ABK73813.1 | MSMEG_1349 | MSMEG_6680 | Identified by match to protein family HMM PF04946. | Integral membrane protein; Identified by match to protein family HMM PF04224. | 0.503 |
| ABK71204.1 | ABK71020.1 | MSMEG_0391 | MSMEG_1349 | Rmt3 protein. | Identified by match to protein family HMM PF04946. | 0.664 |
| ABK71204.1 | ABK73468.1 | MSMEG_0391 | MSMEG_4431 | Rmt3 protein. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.721 |
| ABK71204.1 | ABK73813.1 | MSMEG_0391 | MSMEG_6680 | Rmt3 protein. | Integral membrane protein; Identified by match to protein family HMM PF04224. | 0.635 |
| ABK71204.1 | ABK74149.1 | MSMEG_0391 | MSMEG_2179 | Rmt3 protein. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.653 |
| ABK72804.1 | ABK73439.1 | MSMEG_6683 | MSMEG_6681 | Probable peroxiredoxin, putative; Identified by match to protein family HMM PF00578. | Hypothetical protein; Identified by Glimmer2; putative. | 0.555 |
| ABK72804.1 | ABK73813.1 | MSMEG_6683 | MSMEG_6680 | Probable peroxiredoxin, putative; Identified by match to protein family HMM PF00578. | Integral membrane protein; Identified by match to protein family HMM PF04224. | 0.672 |
| ABK72804.1 | ABK74813.1 | MSMEG_6683 | MSMEG_6682 | Probable peroxiredoxin, putative; Identified by match to protein family HMM PF00578. | RNA polymerase sigma-70 factor, putative; Identified by match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. | 0.702 |
| ABK72804.1 | ABK75031.1 | MSMEG_6683 | MSMEG_6684 | Probable peroxiredoxin, putative; Identified by match to protein family HMM PF00578. | Agarase. | 0.825 |
| ABK73439.1 | ABK72804.1 | MSMEG_6681 | MSMEG_6683 | Hypothetical protein; Identified by Glimmer2; putative. | Probable peroxiredoxin, putative; Identified by match to protein family HMM PF00578. | 0.555 |
| ABK73439.1 | ABK73813.1 | MSMEG_6681 | MSMEG_6680 | Hypothetical protein; Identified by Glimmer2; putative. | Integral membrane protein; Identified by match to protein family HMM PF04224. | 0.779 |
| ABK73439.1 | ABK74813.1 | MSMEG_6681 | MSMEG_6682 | Hypothetical protein; Identified by Glimmer2; putative. | RNA polymerase sigma-70 factor, putative; Identified by match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. | 0.796 |
| ABK73439.1 | ABK75031.1 | MSMEG_6681 | MSMEG_6684 | Hypothetical protein; Identified by Glimmer2; putative. | Agarase. | 0.534 |
| ABK73468.1 | ABK71020.1 | MSMEG_4431 | MSMEG_1349 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Identified by match to protein family HMM PF04946. | 0.506 |
| ABK73468.1 | ABK71204.1 | MSMEG_4431 | MSMEG_0391 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Rmt3 protein. | 0.721 |
| ABK73468.1 | ABK73813.1 | MSMEG_4431 | MSMEG_6680 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Integral membrane protein; Identified by match to protein family HMM PF04224. | 0.651 |
| ABK73468.1 | ABK74149.1 | MSMEG_4431 | MSMEG_2179 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.751 |
| ABK73468.1 | ABK76137.1 | MSMEG_4431 | MSMEG_3179 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.522 |
page 1 of 3