STRINGSTRING
ABK72804.1 ABK72804.1 ABK75031.1 ABK75031.1 ABK74813.1 ABK74813.1 ABK73813.1 ABK73813.1 ABK73439.1 ABK73439.1 ABK75557.1 ABK75557.1 ABK71198.1 ABK71198.1 gabT-3 gabT-3 ABK75718.1 ABK75718.1 ABK75707.1 ABK75707.1 ABK74177.1 ABK74177.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72804.1Probable peroxiredoxin, putative; Identified by match to protein family HMM PF00578. (159 aa)    
Predicted Functional Partners:
ABK75031.1
Agarase.
 
    0.825
ABK74813.1
RNA polymerase sigma-70 factor, putative; Identified by match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.702
ABK73813.1
Integral membrane protein; Identified by match to protein family HMM PF04224.
 
    0.672
ABK73439.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.555
ABK75557.1
Conserved hypothetical protein.
  
    0.485
ABK71198.1
Aldehyde dehydrogenase, thermostable; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
  
 0.472
gabT-3
4-aminobutyrate transaminase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00700; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.467
ABK75718.1
glutaryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
    0.429
ABK75707.1
Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
  
    0.426
ABK74177.1
Identified by match to protein family HMM PF00440.
 
     0.411
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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