STRINGSTRING
ABK73032.1 ABK73032.1 ABK69644.1 ABK69644.1 ABK70374.1 ABK70374.1 ABK72304.1 ABK72304.1 ABK69592.1 ABK69592.1 ABK75103.1 ABK75103.1 ABK71466.1 ABK71466.1 ABK72213.1 ABK72213.1 ABK71821.1 ABK71821.1 ABK69785.1 ABK69785.1 ABK74985.1 ABK74985.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73032.1Conserved hypothetical protein. (289 aa)    
Predicted Functional Partners:
ABK69644.1
Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
    0.942
ABK70374.1
Amino acid permease; Identified by match to protein family HMM PF00324.
 
     0.796
ABK72304.1
IS1096, tnpR protein; Identified by similarity to GP:150004; match to protein family HMM PF07929.
       0.671
ABK69592.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05899.
  
    0.581
ABK75103.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
  
 0.535
ABK71466.1
Amino acid permease-associated region; Identified by match to protein family HMM PF00324.
 
     0.515
ABK72213.1
Transmembrane transport protein; Identified by match to protein family HMM PF02133; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.513
ABK71821.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.502
ABK69785.1
[NADP+] succinate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171.
 
     0.493
ABK74985.1
Amino acid permease-associated region; Identified by match to protein family HMM PF00324.
 
     0.473
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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