Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69860.1 | ABK70860.1 | MSMEG_6716 | MSMEG_6714 | Identified by match to protein family HMM PF01261. | Conserved hypothetical protein. | 0.574 |
ABK69860.1 | ABK72073.1 | MSMEG_6716 | MSMEG_6711 | Identified by match to protein family HMM PF01261. | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | 0.570 |
ABK69860.1 | ABK72752.1 | MSMEG_6716 | MSMEG_6715 | Identified by match to protein family HMM PF01261. | Identified by match to protein family HMM PF01261. | 0.780 |
ABK69860.1 | ABK74864.1 | MSMEG_6716 | MSMEG_6717 | Identified by match to protein family HMM PF01261. | Identified by match to protein family HMM PF01408; match to protein family HMM PF02894. | 0.887 |
ABK69860.1 | ABK75118.1 | MSMEG_6716 | MSMEG_6713 | Identified by match to protein family HMM PF01261. | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | 0.567 |
ABK69860.1 | ABK76222.1 | MSMEG_6716 | MSMEG_6712 | Identified by match to protein family HMM PF01261. | Maleylacetate reductase; Identified by match to protein family HMM PF00465. | 0.586 |
ABK70860.1 | ABK69860.1 | MSMEG_6714 | MSMEG_6716 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01261. | 0.574 |
ABK70860.1 | ABK72073.1 | MSMEG_6714 | MSMEG_6711 | Conserved hypothetical protein. | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | 0.787 |
ABK70860.1 | ABK72752.1 | MSMEG_6714 | MSMEG_6715 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01261. | 0.508 |
ABK70860.1 | ABK73921.1 | MSMEG_6714 | MSMEG_5364 | Conserved hypothetical protein. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.492 |
ABK70860.1 | ABK74571.1 | MSMEG_6714 | MSMEG_4063 | Conserved hypothetical protein. | Identified by match to protein family HMM PF04909. | 0.549 |
ABK70860.1 | ABK74864.1 | MSMEG_6714 | MSMEG_6717 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01408; match to protein family HMM PF02894. | 0.504 |
ABK70860.1 | ABK75057.1 | MSMEG_6714 | MSMEG_1308 | Conserved hypothetical protein. | Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. | 0.487 |
ABK70860.1 | ABK75118.1 | MSMEG_6714 | MSMEG_6713 | Conserved hypothetical protein. | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | 0.863 |
ABK70860.1 | ABK75162.1 | MSMEG_6714 | MSMEG_2953 | Conserved hypothetical protein. | Ethyl tert-butyl ether degradation EthD; Identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118. | 0.544 |
ABK70860.1 | ABK76222.1 | MSMEG_6714 | MSMEG_6712 | Conserved hypothetical protein. | Maleylacetate reductase; Identified by match to protein family HMM PF00465. | 0.891 |
ABK72073.1 | ABK69860.1 | MSMEG_6711 | MSMEG_6716 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Identified by match to protein family HMM PF01261. | 0.570 |
ABK72073.1 | ABK70860.1 | MSMEG_6711 | MSMEG_6714 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Conserved hypothetical protein. | 0.787 |
ABK72073.1 | ABK72752.1 | MSMEG_6711 | MSMEG_6715 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Identified by match to protein family HMM PF01261. | 0.608 |
ABK72073.1 | ABK74864.1 | MSMEG_6711 | MSMEG_6717 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Identified by match to protein family HMM PF01408; match to protein family HMM PF02894. | 0.433 |
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