ABK69860.1 protein (Mycolicibacterium smegmatis)

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Predicted Interactions

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Score

ABK69860.1

Identified by match to protein family HMM PF01261. (273 aa)

Predicted Functional Partners:

ABK74864.1

0.887

ABK72752.1

0.780

ABK75307.1

0.732

ABK69583.1

0.700

ABK75421.1

0.621

mutM

0.608

ABK72686.1

0.604

mutY

0.592

ku

0.591

ABK76222.1

0.586

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69583.1	ABK69860.1	MSMEG_6588	MSMEG_6716	Fumarylacetoacetate; Identified by match to protein family HMM PF01557.	Identified by match to protein family HMM PF01261.	0.700
ABK69583.1	ABK72752.1	MSMEG_6588	MSMEG_6715	Fumarylacetoacetate; Identified by match to protein family HMM PF01557.	Identified by match to protein family HMM PF01261.	0.700
ABK69860.1	ABK69583.1	MSMEG_6716	MSMEG_6588	Identified by match to protein family HMM PF01261.	Fumarylacetoacetate; Identified by match to protein family HMM PF01557.	0.700
ABK69860.1	ABK72686.1	MSMEG_6716	MSMEG_4664	Identified by match to protein family HMM PF01261.	IolD protein; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.	0.604
ABK69860.1	ABK72752.1	MSMEG_6716	MSMEG_6715	Identified by match to protein family HMM PF01261.	Identified by match to protein family HMM PF01261.	0.780
ABK69860.1	ABK74864.1	MSMEG_6716	MSMEG_6717	Identified by match to protein family HMM PF01261.	Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.	0.887
ABK69860.1	ABK75307.1	MSMEG_6716	MSMEG_2005	Identified by match to protein family HMM PF01261.	Sugar phosphate isomerase/epimerase; Identified by match to protein family HMM PF01261.	0.732
ABK69860.1	ABK75421.1	MSMEG_6716	MSMEG_6718	Identified by match to protein family HMM PF01261.	Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.	0.621
ABK69860.1	ABK76222.1	MSMEG_6716	MSMEG_6712	Identified by match to protein family HMM PF01261.	Maleylacetate reductase; Identified by match to protein family HMM PF00465.	0.586
ABK69860.1	ku	MSMEG_6716	MSMEG_5580	Identified by match to protein family HMM PF01261.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) repair enzyme which repairs blunt-end and 5'-overhang double strand breaks (DSB) with about 50% fidelity, and DSB with non-complementary 3' ends. Plays a partial role in NHEJ on 3'-overhang repair of complementary ends. NHEJ repairs DSB with blunt ends and 5' overhangs with a high level of nucleotide insertion/deletion, without a need for microhomology. This protein but not LigD also suppresses homologous recombination. Overexpression dramatically increases the efficiency of NHEJ with no effect on repair fidelity.	0.591
ABK69860.1	mutM	MSMEG_6716	MSMEG_2419	Identified by match to protein family HMM PF01261.	formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Acts on oxidized purines, such as 7,8-dihydro-8- oxoguanine (8-oxoG) when paired with C, G or T. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates; Belongs to the FPG family.	0.608
ABK69860.1	mutY	MSMEG_6716	MSMEG_6083	Identified by match to protein family HMM PF01261.	Base excision DNA repair protein, HhH-GPD family protein; Adenine glycosylase active on G:A and C:A mispairs, as well as processing 7,8-dihydro-8-oxoguanine:A (8-oxoG) mismatches. Belongs to the Nth/MutY family.	0.592
ABK72686.1	ABK69860.1	MSMEG_4664	MSMEG_6716	IolD protein; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.	Identified by match to protein family HMM PF01261.	0.604
ABK72686.1	ABK72752.1	MSMEG_4664	MSMEG_6715	IolD protein; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.	Identified by match to protein family HMM PF01261.	0.666
ABK72686.1	ABK74864.1	MSMEG_4664	MSMEG_6717	IolD protein; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.	Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.	0.752
ABK72686.1	ABK75307.1	MSMEG_4664	MSMEG_2005	IolD protein; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.	Sugar phosphate isomerase/epimerase; Identified by match to protein family HMM PF01261.	0.688
ABK72752.1	ABK69583.1	MSMEG_6715	MSMEG_6588	Identified by match to protein family HMM PF01261.	Fumarylacetoacetate; Identified by match to protein family HMM PF01557.	0.700
ABK72752.1	ABK69860.1	MSMEG_6715	MSMEG_6716	Identified by match to protein family HMM PF01261.	Identified by match to protein family HMM PF01261.	0.780
ABK72752.1	ABK72686.1	MSMEG_6715	MSMEG_4664	Identified by match to protein family HMM PF01261.	IolD protein; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.	0.666
ABK72752.1	ABK74864.1	MSMEG_6715	MSMEG_6717	Identified by match to protein family HMM PF01261.	Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.	0.884