STRINGSTRING
ABK75421.1 ABK75421.1 ABK73666.1 ABK73666.1 ABK72776.1 ABK72776.1 ABK72240.1 ABK72240.1 ABK73259.1 ABK73259.1 ABK72520.1 ABK72520.1 ABK76174.1 ABK76174.1 ABK69860.1 ABK69860.1 ABK72752.1 ABK72752.1 ABK74864.1 ABK74864.1 ABK74699.1 ABK74699.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75421.1Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. (455 aa)    
Predicted Functional Partners:
ABK73666.1
Epoxide hydrolase; Identified by match to protein family HMM PF00561.
  
    0.779
ABK72776.1
Toluate 1,2-dioxygenase beta subunit; Identified by match to protein family HMM PF00866.
 
  
 0.690
ABK72240.1
D-galactonate transporter; Identified by match to protein family HMM PF07690.
 
  
 0.687
ABK73259.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
  
 0.686
ABK72520.1
Major facilitator superfamily protein; Identified by match to protein family HMM PF07690.
 
  
 0.671
ABK76174.1
Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF07690.
 
  
 0.669
ABK69860.1
Identified by match to protein family HMM PF01261.
 
    0.621
ABK72752.1
Identified by match to protein family HMM PF01261.
 
    0.590
ABK74864.1
Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
  
  
 0.560
ABK74699.1
Benzoate 1,2-dioxygenase alpha subunit; Identified by match to protein family HMM PF00355; match to protein family HMM PF00848.
 
  
 0.519
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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