STRINGSTRING
ABK75409.1 ABK75409.1 ABK73402.1 ABK73402.1 ABK75216.1 ABK75216.1 ABK73558.1 ABK73558.1 ABK69850.1 ABK69850.1 ABK69628.1 ABK69628.1 ABK73328.1 ABK73328.1 ABK73092.1 ABK73092.1 ABK70567.1 ABK70567.1 ABK73405.1 ABK73405.1 etfB etfB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75409.1Conserved hypothetical protein. (162 aa)    
Predicted Functional Partners:
ABK73402.1
Amino acid permease-associated region; Identified by match to protein family HMM PF00324.
 
    0.847
ABK75216.1
Integral membrane protein.
 
    0.764
ABK73558.1
Conserved hypothetical protein.
 
    0.705
ABK69850.1
Conserved hypothetical protein.
 
  
 0.681
ABK69628.1
Conserved hypothetical protein.
  
    0.667
ABK73328.1
ATPase.
  
    0.667
ABK73092.1
Protein IolB; Identified by match to protein family HMM PF06845.
   
    0.644
ABK70567.1
Conserved hypothetical protein.
 
    0.630
ABK73405.1
Putative oxidoreductase YdbC; Identified by match to protein family HMM PF00248.
  
    0.542
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
   
  
 0.517
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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