STRINGSTRING
ABK74780.1 ABK74780.1 ABK76110.1 ABK76110.1 ABK73782.1 ABK73782.1 ABK75769.1 ABK75769.1 ABK72248.1 ABK72248.1 ABK71913.1 ABK71913.1 ABK75425.1 ABK75425.1 ABK75732.1 ABK75732.1 ABK73908.1 ABK73908.1 ABK75896.1 ABK75896.1 ABK76215.1 ABK76215.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74780.1Probable transcriptional regulator YdhC; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. (227 aa)    
Predicted Functional Partners:
ABK76110.1
Transcriptional regulator, GntR family protein, putative; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
    0.775
ABK73782.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
    0.773
ABK75769.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
     0.771
ABK72248.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
     0.771
ABK71913.1
Transcriptional regulator, GntR family protein, putative; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
     0.766
ABK75425.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
    0.766
ABK75732.1
Transcriptional Regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
    0.765
ABK73908.1
Regulatory protein GntR, HTH:GntR; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
    0.754
ABK75896.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.751
ABK76215.1
GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.751
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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