Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71628.1 | ABK71998.1 | MSMEG_6744 | MSMEG_6745 | Oxidoreductase FAD/NAD; Identified by match to protein family HMM PF01243. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.642 |
| ABK71628.1 | ABK73507.1 | MSMEG_6744 | MSMEG_6743 | Oxidoreductase FAD/NAD; Identified by match to protein family HMM PF01243. | Lactoylglutathione lyase; Identified by match to protein family HMM PF00903. | 0.941 |
| ABK71998.1 | ABK71628.1 | MSMEG_6745 | MSMEG_6744 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Oxidoreductase FAD/NAD; Identified by match to protein family HMM PF01243. | 0.642 |
| ABK71998.1 | ABK72182.1 | MSMEG_6745 | MSMEG_4401 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Phosphonoacetaldehyde hydrolase; Identified by match to protein family HMM PF00702. | 0.487 |
| ABK71998.1 | ABK73155.1 | MSMEG_6745 | MSMEG_2794 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Transcriptional regulator, GntR family protein; Identified by similarity to SP:P33233; match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.458 |
| ABK71998.1 | ABK73507.1 | MSMEG_6745 | MSMEG_6743 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Lactoylglutathione lyase; Identified by match to protein family HMM PF00903. | 0.618 |
| ABK71998.1 | ABK74448.1 | MSMEG_6745 | MSMEG_0548 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.448 |
| ABK71998.1 | ABK74527.1 | MSMEG_6745 | MSMEG_0948 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Conserved hypothetical protein; Belongs to the UPF0336 family. | 0.826 |
| ABK71998.1 | nagA | MSMEG_6745 | MSMEG_2119 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.446 |
| ABK71998.1 | phnC | MSMEG_6745 | MSMEG_0647 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | 0.445 |
| ABK71998.1 | phnD | MSMEG_6745 | MSMEG_0649 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | 0.460 |
| ABK71998.1 | rbsK | MSMEG_6745 | MSMEG_4585 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.442 |
| ABK72182.1 | ABK71998.1 | MSMEG_4401 | MSMEG_6745 | Phosphonoacetaldehyde hydrolase; Identified by match to protein family HMM PF00702. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.487 |
| ABK72182.1 | phnC | MSMEG_4401 | MSMEG_0647 | Phosphonoacetaldehyde hydrolase; Identified by match to protein family HMM PF00702. | Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for energy coupling to the transport system. | 0.443 |
| ABK72182.1 | phnD | MSMEG_4401 | MSMEG_0649 | Phosphonoacetaldehyde hydrolase; Identified by match to protein family HMM PF00702. | Phosphonate-binding periplasmic protein; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for phosphate binding. Belongs to the phosphate/phosphite/phosphonate binding protein family. | 0.484 |
| ABK73155.1 | ABK71998.1 | MSMEG_2794 | MSMEG_6745 | Transcriptional regulator, GntR family protein; Identified by similarity to SP:P33233; match to protein family HMM PF00392; match to protein family HMM PF07729. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.458 |
| ABK73507.1 | ABK71628.1 | MSMEG_6743 | MSMEG_6744 | Lactoylglutathione lyase; Identified by match to protein family HMM PF00903. | Oxidoreductase FAD/NAD; Identified by match to protein family HMM PF01243. | 0.941 |
| ABK73507.1 | ABK71998.1 | MSMEG_6743 | MSMEG_6745 | Lactoylglutathione lyase; Identified by match to protein family HMM PF00903. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.618 |
| ABK74448.1 | ABK71998.1 | MSMEG_0548 | MSMEG_6745 | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.448 |
| ABK74527.1 | ABK71998.1 | MSMEG_0948 | MSMEG_6745 | Conserved hypothetical protein; Belongs to the UPF0336 family. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.826 |
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