STRINGSTRING
ABK74727.1 ABK74727.1 ABK72643.1 ABK72643.1 ABK71481.1 ABK71481.1 ABK75527.1 ABK75527.1 ABK73610.1 ABK73610.1 ABK70789.1 ABK70789.1 ABK69842.1 ABK69842.1 ABK71854.1 ABK71854.1 pks pks ABK73894.1 ABK73894.1 ABK74062.1 ABK74062.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74727.1Oxidoreductase; Identified by match to protein family HMM PF00561. (274 aa)    
Predicted Functional Partners:
ABK72643.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.729
ABK71481.1
Conserved hypothetical protein.
       0.633
ABK75527.1
Transcriptional regulator; Identified by match to protein family HMM PF01022.
       0.631
ABK73610.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07336.
 
    0.581
ABK70789.1
Probable membrane protein.
  
  
 0.579
ABK69842.1
Alpha/beta hydrolase; Identified by match to protein family HMM PF00561.
 
 0.569
ABK71854.1
Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
 
 
 0.495
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
  
 
 0.491
ABK73894.1
Conserved hypothetical protein.
 
     0.486
ABK74062.1
Conserved hypothetical protein.
  
    0.485
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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