Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69941.1 | ABK72666.1 | MSMEG_6771 | MSMEG_6772 | Conserved hypothetical protein. | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | 0.572 |
ABK69941.1 | ABK73900.1 | MSMEG_6771 | MSMEG_6769 | Conserved hypothetical protein. | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | 0.422 |
ABK69941.1 | ABK75241.1 | MSMEG_6771 | MSMEG_6770 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.713 |
ABK70529.1 | ABK72287.1 | MSMEG_6767 | MSMEG_5107 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Secreted protein. | 0.436 |
ABK70529.1 | ABK73900.1 | MSMEG_6767 | MSMEG_6769 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | 0.552 |
ABK70529.1 | ABK74360.1 | MSMEG_6767 | MSMEG_6768 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Halogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04820. | 0.764 |
ABK70529.1 | ABK75241.1 | MSMEG_6767 | MSMEG_6770 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Conserved hypothetical protein. | 0.460 |
ABK72287.1 | ABK70529.1 | MSMEG_5107 | MSMEG_6767 | Secreted protein. | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | 0.436 |
ABK72287.1 | ABK74277.1 | MSMEG_5107 | MSMEG_2311 | Secreted protein. | Conserved hypothetical protein. | 0.518 |
ABK72287.1 | ABK75160.1 | MSMEG_5107 | MSMEG_1031 | Secreted protein. | Conserved hypothetical protein. | 0.512 |
ABK72287.1 | ABK75241.1 | MSMEG_5107 | MSMEG_6770 | Secreted protein. | Conserved hypothetical protein. | 0.427 |
ABK72666.1 | ABK69941.1 | MSMEG_6772 | MSMEG_6771 | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | Conserved hypothetical protein. | 0.572 |
ABK72666.1 | ABK75241.1 | MSMEG_6772 | MSMEG_6770 | Homoserine O-acetyltransferase; Identified by match to protein family HMM PF00561; Belongs to the AB hydrolase superfamily. MetX family. | Conserved hypothetical protein. | 0.517 |
ABK73900.1 | ABK69941.1 | MSMEG_6769 | MSMEG_6771 | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | Conserved hypothetical protein. | 0.422 |
ABK73900.1 | ABK70529.1 | MSMEG_6769 | MSMEG_6767 | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | 0.552 |
ABK73900.1 | ABK74360.1 | MSMEG_6769 | MSMEG_6768 | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | Halogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04820. | 0.846 |
ABK73900.1 | ABK75241.1 | MSMEG_6769 | MSMEG_6770 | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | Conserved hypothetical protein. | 0.458 |
ABK74277.1 | ABK72287.1 | MSMEG_2311 | MSMEG_5107 | Conserved hypothetical protein. | Secreted protein. | 0.518 |
ABK74277.1 | ABK75241.1 | MSMEG_2311 | MSMEG_6770 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
ABK74360.1 | ABK70529.1 | MSMEG_6768 | MSMEG_6767 | Halogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04820. | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | 0.764 |
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