Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70749.1 | ABK72525.1 | MSMEG_6786 | MSMEG_6783 | Conserved hypothetical protein. | Integral membrane protein. | 0.436 |
ABK70749.1 | ABK73144.1 | MSMEG_6786 | MSMEG_6784 | Conserved hypothetical protein. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.571 |
ABK70873.1 | ABK73144.1 | MSMEG_0361 | MSMEG_6784 | Identified by match to protein family HMM PF00933. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.446 |
ABK72525.1 | ABK70749.1 | MSMEG_6783 | MSMEG_6786 | Integral membrane protein. | Conserved hypothetical protein. | 0.436 |
ABK72525.1 | ABK73144.1 | MSMEG_6783 | MSMEG_6784 | Integral membrane protein. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.596 |
ABK73144.1 | ABK70749.1 | MSMEG_6784 | MSMEG_6786 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Conserved hypothetical protein. | 0.571 |
ABK73144.1 | ABK70873.1 | MSMEG_6784 | MSMEG_0361 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Identified by match to protein family HMM PF00933. | 0.446 |
ABK73144.1 | ABK72525.1 | MSMEG_6784 | MSMEG_6783 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Integral membrane protein. | 0.596 |
ABK73144.1 | ABK74159.1 | MSMEG_6784 | MSMEG_3914 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.573 |
ABK74159.1 | ABK73144.1 | MSMEG_3914 | MSMEG_6784 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.573 |