Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70579.1 | ABK75393.1 | MSMEG_6826 | MSMEG_6824 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Identified by match to protein family HMM PF01047. | 0.421 |
| ABK70579.1 | ABK75764.1 | MSMEG_6826 | MSMEG_6825 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Caax amino protease family protein, putative; Identified by match to protein family HMM PF02517. | 0.534 |
| ABK70987.1 | ABK74818.1 | MSMEG_0866 | MSMEG_0754 | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF04851. | Conserved hypothetical protein. | 0.523 |
| ABK70987.1 | ABK75393.1 | MSMEG_0866 | MSMEG_6824 | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF04851. | Identified by match to protein family HMM PF01047. | 0.434 |
| ABK70987.1 | nucS | MSMEG_0866 | MSMEG_4923 | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF04851. | Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.570 |
| ABK71565.1 | ABK74818.1 | MSMEG_4688 | MSMEG_0754 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | Conserved hypothetical protein. | 0.760 |
| ABK71565.1 | ABK75393.1 | MSMEG_4688 | MSMEG_6824 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | Identified by match to protein family HMM PF01047. | 0.501 |
| ABK71565.1 | clpS | MSMEG_4688 | MSMEG_4910 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.491 |
| ABK71565.1 | mca | MSMEG_4688 | MSMEG_5261 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetyl-cysteinyl-glucosaminyl-inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics. Activity is specific for the mycothiol moiety. | 0.794 |
| ABK72041.1 | ABK75393.1 | MSMEG_3117 | MSMEG_6824 | Cytochrome aa3 controlling protein; Identified by match to protein family HMM PF02628. | Identified by match to protein family HMM PF01047. | 0.425 |
| ABK72041.1 | clpS | MSMEG_3117 | MSMEG_4910 | Cytochrome aa3 controlling protein; Identified by match to protein family HMM PF02628. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.457 |
| ABK73899.1 | ABK75393.1 | MSMEG_6823 | MSMEG_6824 | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Identified by match to protein family HMM PF01047. | 0.482 |
| ABK74818.1 | ABK70987.1 | MSMEG_0754 | MSMEG_0866 | Conserved hypothetical protein. | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF04851. | 0.523 |
| ABK74818.1 | ABK71565.1 | MSMEG_0754 | MSMEG_4688 | Conserved hypothetical protein. | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | 0.760 |
| ABK74818.1 | ABK75393.1 | MSMEG_0754 | MSMEG_6824 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01047. | 0.518 |
| ABK74818.1 | mca | MSMEG_0754 | MSMEG_5261 | Conserved hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetyl-cysteinyl-glucosaminyl-inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics. Activity is specific for the mycothiol moiety. | 0.759 |
| ABK75393.1 | ABK70579.1 | MSMEG_6824 | MSMEG_6826 | Identified by match to protein family HMM PF01047. | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.421 |
| ABK75393.1 | ABK70987.1 | MSMEG_6824 | MSMEG_0866 | Identified by match to protein family HMM PF01047. | DNA or RNA helicase of superfamily protein II; Identified by match to protein family HMM PF04851. | 0.434 |
| ABK75393.1 | ABK71565.1 | MSMEG_6824 | MSMEG_4688 | Identified by match to protein family HMM PF01047. | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | 0.501 |
| ABK75393.1 | ABK72041.1 | MSMEG_6824 | MSMEG_3117 | Identified by match to protein family HMM PF01047. | Cytochrome aa3 controlling protein; Identified by match to protein family HMM PF02628. | 0.425 |
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