Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69601.1 | ABK70442.1 | MSMEG_5726 | MSMEG_0085 | Conserved hypothetical protein; Belongs to the HpcH/HpaI aldolase family. | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | 0.489 |
| ABK69601.1 | ABK72198.1 | MSMEG_5726 | MSMEG_6863 | Conserved hypothetical protein; Belongs to the HpcH/HpaI aldolase family. | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | 0.505 |
| ABK70442.1 | ABK69601.1 | MSMEG_0085 | MSMEG_5726 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | Conserved hypothetical protein; Belongs to the HpcH/HpaI aldolase family. | 0.489 |
| ABK70442.1 | ABK71938.1 | MSMEG_0085 | MSMEG_4713 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | 0.489 |
| ABK70442.1 | ABK72198.1 | MSMEG_0085 | MSMEG_6863 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | 0.752 |
| ABK70442.1 | araA | MSMEG_0085 | MSMEG_1715 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.745 |
| ABK70442.1 | metH | MSMEG_0085 | MSMEG_4185 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.615 |
| ABK70812.1 | ABK72198.1 | MSMEG_3357 | MSMEG_6863 | Metal-dependent phosphohydrolase, HD subdomain. | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | 0.577 |
| ABK71938.1 | ABK70442.1 | MSMEG_4713 | MSMEG_0085 | HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | 0.489 |
| ABK71938.1 | ABK72198.1 | MSMEG_4713 | MSMEG_6863 | HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | 0.505 |
| ABK72198.1 | ABK69601.1 | MSMEG_6863 | MSMEG_5726 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | Conserved hypothetical protein; Belongs to the HpcH/HpaI aldolase family. | 0.505 |
| ABK72198.1 | ABK70442.1 | MSMEG_6863 | MSMEG_0085 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | 0.752 |
| ABK72198.1 | ABK70812.1 | MSMEG_6863 | MSMEG_3357 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | Metal-dependent phosphohydrolase, HD subdomain. | 0.577 |
| ABK72198.1 | ABK71938.1 | MSMEG_6863 | MSMEG_4713 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | 0.505 |
| ABK72198.1 | ABK75060.1 | MSMEG_6863 | MSMEG_6862 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | Putative transcription regulator; Identified by match to protein family HMM PF00440. | 0.776 |
| ABK72198.1 | ABK75297.1 | MSMEG_6863 | MSMEG_6884 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | 8-hydroxy-5-deazaflavin:NADPH oxidoreductase; Identified by match to protein family HMM PF03807. | 0.559 |
| ABK72198.1 | ABK76090.1 | MSMEG_6863 | MSMEG_6861 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.544 |
| ABK72198.1 | araA | MSMEG_6863 | MSMEG_1715 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.566 |
| ABK72198.1 | metH | MSMEG_6863 | MSMEG_4185 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.588 |
| ABK72198.1 | saeC | MSMEG_6863 | MSMEG_0046 | Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.671 |
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