Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70439.1 | ABK70622.1 | MSMEG_4687 | MSMEG_1425 | Cytosine deaminase; Identified by match to protein family HMM PF00383. | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | 0.903 |
ABK70439.1 | ABK71498.1 | MSMEG_4687 | MSMEG_6870 | Cytosine deaminase; Identified by match to protein family HMM PF00383. | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | 0.901 |
ABK70622.1 | ABK70439.1 | MSMEG_1425 | MSMEG_4687 | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | Cytosine deaminase; Identified by match to protein family HMM PF00383. | 0.903 |
ABK70622.1 | ABK71469.1 | MSMEG_1425 | MSMEG_0476 | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | Chitin synthase; Identified by match to protein family HMM PF00535; match to protein family HMM PF03142. | 0.498 |
ABK70622.1 | ABK71498.1 | MSMEG_1425 | MSMEG_6870 | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | 0.928 |
ABK70622.1 | ABK72099.1 | MSMEG_1425 | MSMEG_1426 | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | Probable membrane sugar transferase; Identified by match to protein family HMM PF00535. | 0.999 |
ABK70622.1 | ABK72411.1 | MSMEG_1425 | MSMEG_4735 | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | Conserved hypothetical protein. | 0.499 |
ABK70622.1 | ABK73068.1 | MSMEG_1425 | MSMEG_1423 | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.984 |
ABK70622.1 | ABK73646.1 | MSMEG_1425 | MSMEG_1422 | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | Conserved hypothetical protein. | 0.990 |
ABK71469.1 | ABK70622.1 | MSMEG_0476 | MSMEG_1425 | Chitin synthase; Identified by match to protein family HMM PF00535; match to protein family HMM PF03142. | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | 0.498 |
ABK71469.1 | ABK71498.1 | MSMEG_0476 | MSMEG_6870 | Chitin synthase; Identified by match to protein family HMM PF00535; match to protein family HMM PF03142. | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | 0.498 |
ABK71498.1 | ABK70439.1 | MSMEG_6870 | MSMEG_4687 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Cytosine deaminase; Identified by match to protein family HMM PF00383. | 0.901 |
ABK71498.1 | ABK70622.1 | MSMEG_6870 | MSMEG_1425 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Creatininase subfamily protein; Identified by match to protein family HMM PF02633. | 0.928 |
ABK71498.1 | ABK71469.1 | MSMEG_6870 | MSMEG_0476 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Chitin synthase; Identified by match to protein family HMM PF00535; match to protein family HMM PF03142. | 0.498 |
ABK71498.1 | ABK71611.1 | MSMEG_6870 | MSMEG_6872 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.809 |
ABK71498.1 | ABK72099.1 | MSMEG_6870 | MSMEG_1426 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Probable membrane sugar transferase; Identified by match to protein family HMM PF00535. | 0.848 |
ABK71498.1 | ABK72411.1 | MSMEG_6870 | MSMEG_4735 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Conserved hypothetical protein. | 0.498 |
ABK71498.1 | ABK73068.1 | MSMEG_6870 | MSMEG_1423 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.523 |
ABK71498.1 | ABK73327.1 | MSMEG_6870 | MSMEG_6871 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Isomerase; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.863 |
ABK71498.1 | ABK73646.1 | MSMEG_6870 | MSMEG_1422 | Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. | Conserved hypothetical protein. | 0.662 |
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