Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70467.1 | ABK75402.1 | MSMEG_6901 | MSMEG_6898 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.511 |
ABK70467.1 | ABK76198.1 | MSMEG_6901 | MSMEG_6899 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.850 |
ABK70467.1 | ponA1 | MSMEG_6901 | MSMEG_6900 | Conserved hypothetical protein. | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | 0.834 |
ABK75402.1 | ABK70467.1 | MSMEG_6898 | MSMEG_6901 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.511 |
ABK75402.1 | ABK76198.1 | MSMEG_6898 | MSMEG_6899 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.775 |
ABK75402.1 | ponA1 | MSMEG_6898 | MSMEG_6900 | Hypothetical protein; Identified by Glimmer2; putative. | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | 0.776 |
ABK76198.1 | ABK70467.1 | MSMEG_6899 | MSMEG_6901 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.850 |
ABK76198.1 | ABK75402.1 | MSMEG_6899 | MSMEG_6898 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.775 |
ABK76198.1 | ponA1 | MSMEG_6899 | MSMEG_6900 | Conserved hypothetical protein. | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | 0.909 |
ponA1 | ABK70467.1 | MSMEG_6900 | MSMEG_6901 | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | Conserved hypothetical protein. | 0.834 |
ponA1 | ABK75402.1 | MSMEG_6900 | MSMEG_6898 | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | Hypothetical protein; Identified by Glimmer2; putative. | 0.776 |
ponA1 | ABK76198.1 | MSMEG_6900 | MSMEG_6899 | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | Conserved hypothetical protein. | 0.909 |