STRINGSTRING
ABK76198.1 ABK76198.1 ponA1 ponA1 ABK70467.1 ABK70467.1 ABK75402.1 ABK75402.1 pimE pimE ABK75658.1 ABK75658.1 ABK73169.1 ABK73169.1 ABK73947.1 ABK73947.1 ABK73310.1 ABK73310.1 priA priA ABK73349.1 ABK73349.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76198.1Conserved hypothetical protein. (554 aa)    
Predicted Functional Partners:
ponA1
Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity).
  
    0.909
ABK70467.1
Conserved hypothetical protein.
 
     0.850
ABK75402.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.775
pimE
Conserved transmembrane protein; Catalyzes the alpha-1,2 addition of a mannose residue from polyprenol-phosphate-mannose (PPM) to a monoacyl phosphatidylinositol pentamannoside (AcPIM5) to generate a monoacyl phosphatidylinositol hexamannoside (AcPIM6).
  
  
 0.754
ABK75658.1
Conserved hypothetical protein.
  
    0.685
ABK73169.1
Probable conserved transmembrane protein rich in alanine.
  
    0.667
ABK73947.1
Conserved hypothetical protein; Catalyzes the addition of alpha-(1->6)-mannose residue.
 
  
 0.637
ABK73310.1
Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.
  
     0.633
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
  
     0.618
ABK73349.1
Conserved hypothetical protein.
  
    0.608
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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