STRINGSTRING
ABK70467.1 ABK70467.1 ABK76198.1 ABK76198.1 ponA1 ponA1 ABK72397.1 ABK72397.1 ABK73781.1 ABK73781.1 ABK71106.1 ABK71106.1 ABK70164.1 ABK70164.1 ABK73349.1 ABK73349.1 ABK74248.1 ABK74248.1 ABK74651.1 ABK74651.1 ABK69890.1 ABK69890.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70467.1Conserved hypothetical protein. (162 aa)    
Predicted Functional Partners:
ABK76198.1
Conserved hypothetical protein.
 
     0.850
ponA1
Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity).
  
  
 0.834
ABK72397.1
Conserved hypothetical protein.
  
    0.735
ABK73781.1
Amino acid-binding ACT; Identified by match to protein family HMM PF01842.
  
     0.729
ABK71106.1
35 kDa protein; Identified by match to protein family HMM PF04012.
  
    0.722
ABK70164.1
LpqE protein.
  
  
 0.667
ABK73349.1
Conserved hypothetical protein.
  
    0.666
ABK74248.1
Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
    0.661
ABK74651.1
Putative membrane protein; Identified by match to protein family HMM PF08044.
  
    0.636
ABK69890.1
Conserved hypothetical protein.
  
    0.621
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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