STRINGSTRING
ABK74018.1 ABK74018.1 ABK71078.1 ABK71078.1 ABK75360.1 ABK75360.1 ABK73065.1 ABK73065.1 rv1174c rv1174c ABK75484.1 ABK75484.1 ABK71068.1 ABK71068.1 leuS leuS rbfA rbfA ABK69548.1 ABK69548.1 ABK72431.1 ABK72431.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74018.1Proline-rich 28 kDa antigen. (314 aa)    
Predicted Functional Partners:
ABK71078.1
Transcriptional repressor, CopY family protein; Identified by match to protein family HMM PF03965.
   
  
 0.778
ABK75360.1
Immunogenic protein MPB64/MPT64.
   
  
 0.760
ABK73065.1
Immunogenic protein MPB64/MPT64.
      
 0.758
rv1174c
Conserved hypothetical protein.
   
  
 0.685
ABK75484.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.639
ABK71068.1
Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
   
  
 0.602
leuS
leucyl-tRNA synthetase; Identified by match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.551
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
   
  
 0.521
ABK69548.1
Endonuclease/exonuclease/phosphatase; Identified by match to protein family HMM PF03372.
   
    0.440
ABK72431.1
Glutamate binding protein; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
   
  
 0.438
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (18%) [HD]