STRINGSTRING
ABK71568.1 ABK71568.1 ABK70339.1 ABK70339.1 ABK72169.1 ABK72169.1 ABK71915.1 ABK71915.1 ABK73539.1 ABK73539.1 ABK74759.1 ABK74759.1 ABK74512.1 ABK74512.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71568.1Conserved hypothetical protein; Identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03084. (257 aa)    
Predicted Functional Partners:
ABK70339.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
  
    0.772
ABK72169.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07287.
 
    0.715
ABK71915.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07287.
 
    0.647
ABK73539.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
  
    0.626
ABK74759.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02622; Belongs to the UPF0301 (AlgH) family.
       0.567
ABK74512.1
acyl-CoA dehydrogenase fadE12; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
    0.528
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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