STRINGSTRING
ABK72725.1 ABK72725.1 ABK73864.1 ABK73864.1 ABK72616.1 ABK72616.1 ABK73344.1 ABK73344.1 ABK73169.1 ABK73169.1 ABK75511.1 ABK75511.1 ABK72554.1 ABK72554.1 ABK71502.1 ABK71502.1 ABK70164.1 ABK70164.1 ABK74693.1 ABK74693.1 trxB trxB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72725.1Conserved hypothetical protein. (245 aa)    
Predicted Functional Partners:
ABK73864.1
Conserved hypothetical protein.
  
    0.755
ABK72616.1
Probable conserved integral membrane protein; Identified by match to protein family HMM PF02517.
 
    0.745
ABK73344.1
Conserved hypothetical protein.
  
    0.708
ABK73169.1
Probable conserved transmembrane protein rich in alanine.
  
     0.685
ABK75511.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04167.
  
    0.680
ABK72554.1
Conserved hypothetical protein.
 
    0.679
ABK71502.1
Conserved hypothetical protein.
 
  
 0.673
ABK70164.1
LpqE protein.
  
    0.667
ABK74693.1
Conserved hypothetical protein.
  
    0.650
trxB
Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
  
    0.643
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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