STRINGSTRING
ACS38079.1 ACS38079.1 ACS38075.1 ACS38075.1 ACS38076.1 ACS38076.1 ACS38074.1 ACS38074.1 ACS38077.1 ACS38077.1 tsf tsf ACS38081.1 ACS38081.1 ACS38078.1 ACS38078.1 rpsB rpsB rpsL rpsL rpsG rpsG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ACS38079.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (318 aa)    
Predicted Functional Partners:
ACS38075.1
Putative 4Fe-4S ferredoxin, iron-sulfur binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.990
ACS38076.1
Polysulphide reductase, NrfD; Function of strongly homologous gene; enzyme.
 
 
 0.982
ACS38074.1
Putative nitrite reductase, formate-dependent, penta-heme cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
 
 0.972
ACS38077.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.971
tsf
Protein chain elongation factor EF-Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
   
 0.956
ACS38081.1
Putative Cytochrome c oxidase, subunit II (coxB-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.955
ACS38078.1
Putative cytochrome c family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
    0.952
rpsB
30S ribosomal protein S2; Function of strongly homologous gene; structure; Belongs to the universal ribosomal protein uS2 family.
  
 0.941
rpsL
30S ribosomal subunit protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
  
 0.941
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
  
 0.941
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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