Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38144.1 | ACS38145.1 | MexAM1_META1p0182 | MexAM1_META1p0183 | Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putative transcriptional regulator, arsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.561 |
ACS38145.1 | ACS38144.1 | MexAM1_META1p0183 | MexAM1_META1p0182 | Putative transcriptional regulator, arsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.561 |
ACS38145.1 | ACS39551.1 | MexAM1_META1p0183 | MexAM1_META1p1706 | Putative transcriptional regulator, arsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator. | 0.425 |
ACS38145.1 | trpS | MexAM1_META1p0183 | MexAM1_META1p0184 | Putative transcriptional regulator, arsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | Tryptophanyl tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.494 |
ACS39551.1 | ACS38145.1 | MexAM1_META1p1706 | MexAM1_META1p0183 | Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator. | Putative transcriptional regulator, arsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.425 |
trpS | ACS38145.1 | MexAM1_META1p0184 | MexAM1_META1p0183 | Tryptophanyl tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | Putative transcriptional regulator, arsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. | 0.494 |