STRINGSTRING
ACS38209.1 ACS38209.1 bioD bioD ACS38322.1 ACS38322.1 ACS38208.1 ACS38208.1 bioB bioB bioA bioA hemB hemB ACS39663.1 ACS39663.1 ACS38207.1 ACS38207.1 ACS40861.1 ACS40861.1 argD argD
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ACS38209.1Putative 5-aminolevulinate synthase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (136 aa)    
Predicted Functional Partners:
bioD
Dethiobiotin synthetase (Dethiobiotin synthase) (DTB synthetase) (DTBS); Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
 
  
 0.885
ACS38322.1
Putative 2-amino-3-ketobutyrate coenzyme A ligase (AKB ligase) (Glycine acetyltransferase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.775
ACS38208.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
bioB
Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.742
bioA
Adenosylmethionine---8-amino-7-oxononanoate aminotransferase; Function of strongly homologous gene; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.622
hemB
Porphobilinogen synthase; Function of strongly homologous gene; enzyme; Belongs to the ALAD family.
    
 0.563
ACS39663.1
Putative fatty acid synthase multidomain protein (rkpA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.549
ACS38207.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.517
ACS40861.1
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.471
argD
Succinylornithine transaminase, also has acetylornitine transaminase activity, PLP-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
    
 0.432
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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