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rocF rocF arcB arcB argD argD ACS41747.1 ACS41747.1 ACS38696.1 ACS38696.1 argF argF argJ argJ ACS39829.1 ACS39829.1 gatm gatm ureAB ureAB ureAB-2 ureAB-2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
rocFArginase (arginine amidinase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the arginase family. (308 aa)    
Predicted Functional Partners:
arcB
Ornithine cyclodeaminase (OCD); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.974
argD
Succinylornithine transaminase, also has acetylornitine transaminase activity, PLP-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 0.962
ACS41747.1
ATP-dependent urea carboxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.934
ACS38696.1
Ornithine decarboxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.928
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
 0.924
argJ
Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.920
ACS39829.1
Putative ornithine/diaminopimelate PLP-dependent decarboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.918
gatm
Glycine amidinotransferase (L-arginine:glycine amidinotransferase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.917
ureAB
Urease gamma (N-terminal) and beta (C-terminal) subunits (urea amidohydrolase gamma/beta subunits); Function of strongly homologous gene; enzyme; Belongs to the urease gamma subunit family.
    
  0.916
ureAB-2
Urease gamma (N-terminal) and beta (C-terminal) subunits (urea amidohydrolase gamma/beta subunits); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the urease beta subunit family.
    
  0.916
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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