STRINGSTRING
suhB suhB ACS41774.1 ACS41774.1 ACS38593.1 ACS38593.1 ACS38104.1 ACS38104.1 ACS40625.1 ACS40625.1 rpoZ rpoZ apt apt rpoB rpoB rpoC rpoC nusB nusB ACS41662.1 ACS41662.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
suhBInositol monophosphatase; Function of strongly homologous gene; enzyme; Belongs to the inositol monophosphatase superfamily. (264 aa)    
Predicted Functional Partners:
ACS41774.1
Putative L-histidinol-phosphate phosphatase (hisN); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.927
ACS38593.1
Putative inositol monophosphatase (suhB-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.926
ACS38104.1
Myo-inositol-1-phosphate synthase; Function of strongly homologous gene; enzyme.
   
 
 0.910
ACS40625.1
Inositol-3-phosphate synthase; Function of strongly homologous gene; enzyme.
   
 
 0.910
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   0.688
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.644
rpoB
RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.596
rpoC
RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.596
nusB
Transcription antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
   
 
 0.529
ACS41662.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.521
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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