Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS38374.1 | ACS38375.1 | MexAM1_META1p0431 | MexAM1_META1p0432 | Putative Adenylate/Guanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.407 |
ACS38375.1 | ACS38374.1 | MexAM1_META1p0432 | MexAM1_META1p0431 | Hypothetical protein; No homology to any previously reported sequences. | Putative Adenylate/Guanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.407 |
ACS38375.1 | ACS38376.1 | MexAM1_META1p0432 | MexAM1_META1p0433 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.408 |
ACS38375.1 | ACS38377.1 | MexAM1_META1p0432 | MexAM1_META1p0434 | Hypothetical protein; No homology to any previously reported sequences. | Major facilitator superfamily (MFS_1) transporter (Putative tartrate transporter, ttuB); Function of strongly homologous gene; putative transporter. | 0.406 |
ACS38375.1 | ACS39305.1 | MexAM1_META1p0432 | MexAM1_META1p1443 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.492 |
ACS38376.1 | ACS38375.1 | MexAM1_META1p0433 | MexAM1_META1p0432 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.408 |
ACS38376.1 | ACS38377.1 | MexAM1_META1p0433 | MexAM1_META1p0434 | Hypothetical protein; No homology to any previously reported sequences. | Major facilitator superfamily (MFS_1) transporter (Putative tartrate transporter, ttuB); Function of strongly homologous gene; putative transporter. | 0.769 |
ACS38377.1 | ACS38375.1 | MexAM1_META1p0434 | MexAM1_META1p0432 | Major facilitator superfamily (MFS_1) transporter (Putative tartrate transporter, ttuB); Function of strongly homologous gene; putative transporter. | Hypothetical protein; No homology to any previously reported sequences. | 0.406 |
ACS38377.1 | ACS38376.1 | MexAM1_META1p0434 | MexAM1_META1p0433 | Major facilitator superfamily (MFS_1) transporter (Putative tartrate transporter, ttuB); Function of strongly homologous gene; putative transporter. | Hypothetical protein; No homology to any previously reported sequences. | 0.769 |
ACS39305.1 | ACS38375.1 | MexAM1_META1p1443 | MexAM1_META1p0432 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.492 |